1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
|
#!/usr/bin/env python
"""
Script to delete zdab files which have all been successfully fit.
"""
from sddm.logger import Logger
log = Logger()
if __name__ == '__main__':
import argparse
import sqlite3
import os
from os.path import join, split, exists
import numpy as np
parser = argparse.ArgumentParser("delete zdab files which have all been successfully fit")
parser.add_argument("--db", type=str, help="database file", default=None)
parser.add_argument('--loglevel',
help="logging level (debug, verbose, notice, warning)",
default='notice')
parser.add_argument('--logfile', default=None,
help="filename for log file")
args = parser.parse_args()
log.set_verbosity(args.loglevel)
if args.logfile:
log.set_logfile(args.logfile)
home = os.path.expanduser("~")
if args.db is None:
args.db = join(home,'state.db')
conn = sqlite3.connect(args.db)
c = conn.cursor()
results = c.execute('SELECT filename, state FROM state').fetchall()
unique_filenames = set(row[0] for row in results)
for filename in unique_filenames:
if not exists(filename):
continue
head, tail = split(filename)
success = [row[1] == 'SUCCESS' for row in results if row[0] == filename]
if all(success):
log.notice("deleting %s because all %i jobs were successfull" % (tail, len(success)))
os.remove(filename)
else:
log.debug("skipping %s because %i/%i jobs haven't finished" % (tail, len(success) - np.count_nonzero(success), len(success)))
conn.close()
|