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- write cross section section in paper
- explain integral in paper
- develop signal generator
- develop high energy and multi-ring fitter
- write talk for Monday
- write a section on atmospheric backgrounds in paper
- check index of refraction calculation against tables in the paper
- write more tests for the solid angle calculation
- use table from paper
- make sure normal direction is normalized
- speed up likelihood calculation
- rotate and translate path points in path_init
- create fast interp1d for equally spaced points
- optimize with -O2
- only calculate average time if mu_direct[i] is not too small and PMT is
hit
- add likelihood function which calculates total expected charge and only
loops over hit PMTs
- add fast likelihood which doesn't use a 2D lookup table
- add function to compute the Hessian via finite differences
- add function to calculate covariance matrix
- add function to compute the approximate volume in the likelihood space where
the likelihood is greater than some value
- add output to likelihood
- add a set of seed points to start the likelihood
- minimize the likelihood in a do while loop until it converges to a single
point
- once the first position is found, compute the Hough transform to look for
other rings
- add rayleigh scattering to likelihood function
- add muon shower PDF? delta rays?
- calculate path length through acrylic?
- update estar table with energies above 1 GeV
- speed up normalize() and interp1d()
- add shower PDF to get_total_charge_approx()
- compute mean of starting points
- speed up time PDF calculation for fast likelihood
- calculate psi parameter as a goodness of fit test
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