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+from Geant4 import *
+import g4py.ezgeom
+import g4py.NISTmaterials
+import g4py.ParticleGun
+import pyublas
+import numpy
+
+try:
+ import G4chroma
+except:
+ # Try building the module
+ import subprocess
+ import sys, os
+ module_dir = os.path.split(os.path.realpath(__file__))[0]
+ print >>sys.stderr, 'Compiling G4chroma.so...'
+ retcode = subprocess.call('g++ -o \'%s/G4chroma.so\' -shared \'%s/G4chroma.cc\' -fPIC `geant4-config --cflags --libs` `python-config --cflags --libs --ldflags` -lboost_python' % (module_dir, module_dir), shell=True)
+ assert retcode == 0
+ import G4chroma
+
+class G4Generator(object):
+ def __init__(self, material):
+ '''Create generator to produce photons inside the specified material.
+
+ material: chroma.geometry.Material object with density,
+ composition dict and refractive_index.
+
+ composition dictionary should be
+ { element_symbol : fraction_by_weight, ... }.
+ '''
+ g4py.NISTmaterials.Construct()
+ g4py.ezgeom.Construct()
+ self.physics_list = G4chroma.ChromaPhysicsList()
+ gRunManager.SetUserInitialization(self.physics_list)
+ self.particle_gun = g4py.ParticleGun.Construct()
+
+ self.world_material = self.create_g4material(material)
+ g4py.ezgeom.SetWorldMaterial(self.world_material)
+
+ self.world = g4py.ezgeom.G4EzVolume('world')
+ self.world.CreateBoxVolume(self.world_material, 100*m, 100*m, 100*m)
+ self.world.PlaceIt(G4ThreeVector(0,0,0))
+
+ self.tracking_action = G4chroma.PhotonTrackingAction()
+ gRunManager.SetUserAction(self.tracking_action)
+ gRunManager.Initialize()
+
+ def create_g4material(self, material):
+ g4material = G4Material('world_material', material.density * g / cm3,
+ len(material.composition))
+
+ # Add elements
+ for element_name, element_frac_by_weight in material.composition.items():
+ g4material.AddElement(G4Element.GetElement(element_name, True),
+ element_frac_by_weight)
+
+ # Set index of refraction
+ prop_table = G4MaterialPropertiesTable()
+ # Reverse entries so they are in ascending energy order rather
+ # than wavelength
+ energy = list((2*pi*hbarc / (material.refractive_index[::-1,0] * nanometer)).astype(float))
+ values = list(material.refractive_index[::-1, 1].astype(float))
+ prop_table.AddProperty('RINDEX', energy, values)
+
+ # Load properties
+ g4material.SetMaterialPropertiesTable(prop_table)
+ return g4material
+
+
+ def generate_photons(self, particle_name, total_energy, position, direction):
+ '''Use GEANT4 to generate photons produced by the given particle.
+
+ particle_name: GEANT4 name of particle. 'e-', 'mu-', etc
+ total_energy: Total energy of particle (incl rest mass) in MeV
+ position: 3-tuple of position of particle in global coordinates
+ direction: 3-tuple direction vector.
+ Does not have to be normalized.
+ '''
+ self.particle_gun.SetParticleByName(particle_name)
+ self.particle_gun.SetParticleEnergy(total_energy * MeV)
+ self.particle_gun.SetParticlePosition(G4ThreeVector(*position))
+ self.particle_gun.SetParticleMomentumDirection(G4ThreeVector(*direction).unit())
+
+ self.tracking_action.Clear()
+
+ gRunManager.BeamOn(1)
+ n = self.tracking_action.GetNumPhotons()
+ pos = numpy.zeros(shape=(n,3), dtype=numpy.float32)
+ pos[:,0] = self.tracking_action.GetX()
+ pos[:,1] = self.tracking_action.GetY()
+ pos[:,2] = self.tracking_action.GetZ()
+
+ dir = numpy.zeros(shape=(n,3), dtype=numpy.float32)
+ dir[:,0] = self.tracking_action.GetDirX()
+ dir[:,1] = self.tracking_action.GetDirY()
+ dir[:,2] = self.tracking_action.GetDirZ()
+
+ pol = numpy.zeros(shape=(n,3), dtype=numpy.float32)
+ pol[:,0] = self.tracking_action.GetPolX()
+ pol[:,1] = self.tracking_action.GetPolY()
+ pol[:,2] = self.tracking_action.GetPolZ()
+
+ wavelength = self.tracking_action.GetWavelength().astype(numpy.float32)
+ t0 = self.tracking_action.GetT0().astype(numpy.float32)
+ return { 'pos' : pos,
+ 'dir' : dir,
+ 'pol' : pol,
+ 'wavelength' : wavelength,
+ 't0' : t0 }
+
+if __name__ == '__main__':
+ import time
+ import optics
+ gen = G4Generator(optics.water)
+ # prime things
+ gen.generate_photons('e-', 1, (0,0,0), (1,0,0))
+
+ start = time.time()
+ n = 0
+ for i in xrange(100):
+ photons = gen.generate_photons('mu-', 700, (0,0,0), (1,0,0))
+ n += len(photons['t0'])
+ print photons['pos'][0].min(), photons['pos'][0].max()
+ stop = time.time()
+ print stop - start, 'sec'
+ print n / (stop-start), 'photons/sec'