Move CUDA source inside chroma package, rename tests directory to test

1 files changed, 0 insertions, 57 deletions

diff --git a/tests/test_rayleigh.py b/tests/test_rayleigh.py
deleted file mode 100644
index 02ccb41..0000000
--- a/tests/test_rayleigh.py
+++ /dev/null
@@ -1,57 +0,0 @@
-import unittest
-import numpy as np
-
-from chroma.geometry import Solid, Geometry
-from chroma.make import box
-from chroma.sim import Simulation
-from chroma.optics import water_wcsim
-from chroma.event import Photons
-import histogram
-from histogram.root import rootify
-import ROOT
-ROOT.gROOT.SetBatch(1)
-
-class TestRayleigh(unittest.TestCase):
-    def setUp(self):
-        self.cube = Geometry(water_wcsim)
-        self.cube.add_solid(Solid(box(100,100,100), water_wcsim, water_wcsim))
-        self.cube.pmtids = [0]
-        self.cube.build(use_cache=False)
-        self.sim = Simulation(self.cube, geant4_processes=0)
-
-        nphotons = 100000
-        pos = np.tile([0,0,0], (nphotons,1)).astype(np.float32)
-        dir = np.tile([0,0,1], (nphotons,1)).astype(np.float32)
-        pol = np.zeros_like(pos)
-        phi = np.random.uniform(0, 2*np.pi, nphotons).astype(np.float32)
-        pol[:,0] = np.cos(phi)
-        pol[:,1] = np.sin(phi)
-        t = np.zeros(nphotons, dtype=np.float32)
-        wavelengths = np.empty(nphotons, np.float32)
-        wavelengths.fill(400.0)
-
-        self.photons = Photons(pos=pos, dir=dir, pol=pol, t=t, wavelengths=wavelengths)
-
-    def testAngularDistributionPolarized(self):
-        # Fully polarized photons
-        self.photons.pol[:] = [1.0, 0.0, 0.0]
-
-        photons_end = self.sim.simulate([self.photons], keep_photons_end=True, max_steps=1).next().photons_end
-        aborted = (photons_end.flags & (1 << 31)) > 0
-        self.assertFalse(aborted.any())
-
-        # Compute the dot product between initial and final dir
-        rayleigh_scatters = (photons_end.flags & (1 << 4)) > 0
-        cos_scatter = (self.photons.dir[rayleigh_scatters] * photons_end.dir[rayleigh_scatters]).sum(axis=1)
-        theta_scatter = np.arccos(cos_scatter)
-        h = histogram.Histogram(bins=100, range=(0, np.pi))
-        h.fill(theta_scatter)
-        h = rootify(h)
-
-        # The functional form for polarized light should be
-        # (1 + \cos^2 \theta)\sin \theta according to GEANT4 physics
-        # reference manual.
-        f = ROOT.TF1("pol_func", "[0]*(1+cos(x)**2)*sin(x)", 0, np.pi)
-        h.Fit(f)
-        self.assertGreater(f.GetProb(), 1e-3)
-