From f39436190a4066bd6d6ae4a0343e97381808b936 Mon Sep 17 00:00:00 2001 From: tlatorre Date: Tue, 16 Jun 2020 02:20:24 -0500 Subject: update read_hdf() to open hdf5 files in read only mode --- utils/sddm/__init__.py | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/utils/sddm/__init__.py b/utils/sddm/__init__.py index 4df4da8..f213c2b 100644 --- a/utils/sddm/__init__.py +++ b/utils/sddm/__init__.py @@ -180,6 +180,6 @@ def read_hdf(filename, df): Similar to pd.read_hdf() but doesn't require pytables. I'm adding this function since the open science grid login nodes don't have pytables. """ - with h5py.File(filename) as f: + with h5py.File(filename,'r') as f: data = f[df][:] return pd.DataFrame(data) -- cgit