aboutsummaryrefslogtreecommitdiff
AgeCommit message (Collapse)Author
2020-06-16update read_hdf() to open hdf5 files in read only modetlatorre
2020-06-16update follower cuts to be more memory efficient by using ffill()tlatorre
2020-06-16pd.read_hdf() -> read_hdf() so that we can run on gridtlatorre
2020-06-15update cat-grid-jobs to use reprocessed files if they're availabletlatorre
2020-06-15create new plot-dc script to replace plot-energy --dctlatorre
2020-06-14update dc and dc-closure-test to take into account fitted fraction of ↵tlatorre
instrumentals This commit updates the contamination analysis scripts to take into account the fact that we only fit a fraction of some of the instrumental events. Based on the recent rate at which my jobs have been running on the grid, fitting all the events would take *way* too long. Therefore, I'm now planning to only fit 10% of muon, flasher, and neck events. With this commit the contamination analysis will now correctly take into account the fact that we aren't fitting all the instrumental events.
2020-06-14only submit 10% of flashers, neck events, and muonstlatorre
2020-06-14tag instrumentals and michels in get_events()tlatorre
- label instrumentals in get_events() - tag michels and stopping muons in get_events() - update submit-grid-jobs to use get_events()
2020-06-08update submit-grid-jobs to check for unique filenames instead of runstlatorre
2020-06-08fix a bug in the likelihood ratio calculationtlatorre
2020-06-04update plot-energy to calculate likelihood ratiotlatorre
2020-06-02add an option to specify kinetic energy to gen-dark-mattertlatorre
2020-06-02increase max file size to 500 MBtlatorre
2020-06-02update Makefiletlatorre
2020-06-02add a script to move grid files from successful fits to a new directorytlatorre
2020-06-02update contamination closure test scripttlatorre
- print out mean acceptance fraction and autocorrelation time - print standard normal distribution pdf with pull plot histograms
2020-05-31update contamination analysis step sizetlatorre
This commit updates the step size used for the MCMC in the contamination analysis to 0.5 times the error returned by scanning near the minimum. I ran some tests and this seemed to be pretty efficient compared to either the full error or 0.1 times the error. I also reduced the number of workers to 10.
2020-05-31speed up MCMC proposal function by calling ravel() instead of doing a for looptlatorre
2020-05-25don't import from .plot in plot_energy.pytlatorre
This commit updates the plot_energy.py module to not import from plot globally since that means matplotlib gets pulled in by submit-grid-jobs and that causes errors on the grid login nodes.
2020-05-25update contamination analysis stufftlatorre
- fix Constraint.renormalize_no_fix() which could enter an infinite loop if the fixed parameter was greater than 1 - EPSILON - don't divide by psi twice in get_events() - only use prompt events and cut on nhit_cal < 100
2020-05-19always resubmit jobs in the RETRY statetlatorre
2020-05-19update debug messagetlatorre
2020-05-19add a new script to delete zdab files on the grid which were successfully fittlatorre
2020-05-12fix a few bugs in plot_energy.pytlatorre
2020-05-12add --priority argument to submit-grid-jobstlatorre
2020-05-12speed up the contamination analysis scripttlatorre
2020-05-12add a read_hdf() method that doesn't require pytablestlatorre
2020-05-12add a script to do a closure test on the contamination analysistlatorre
2020-05-11update python code to avoid importing matplotlib when running submit-grid-jobstlatorre
2020-05-11update ockham factor, remove hack, and don't submit all flasherstlatorre
This commit contains the following updates: - remove hack to get rid of low energy events in plot-energy since while writing the unidoc I realized it's not necessary now that we add +100 to multi-particle fits - update Ockham factor to use an energy resolution of 5% - update submit-grid-jobs to submit jobs according to the following criteria: - always submit prompt events with no data cleaning cuts - submit 10% of prompt flasher events - submit all other prompt events - submit followers only if they have no data cleaning cuts - update submit-grid-jobs to place the nhit cut of 100 on the calibrated nhit
2020-05-11add setup_matplotlib function and switch to logarithmic binstlatorre
This commit contains the following small updates: - create a setup_matplotlib() function to set up matplotlib correctly depending on if we are saving the plots or just displaying them - change default font size to 12 when displaying plots - switch to using logarithmic bins in plot-energy - fix despine() function when x axis is logarithmic
2020-05-11don't import everything in __init__.pytlatorre
This commit updates utils/sddm/__init__.py to not import everything by default. The reason is that on the open science grid login machine they don't have the module scipy.stats by default.
2020-05-11delete an empty line in e_water_liquid.txttlatorre
2020-05-11update utils/ folder to make a python package called sddmtlatorre
This commit adds an sddm python package to the utils/ folder. This allows me to consolidate code used across all the various scripts. This package is now installed by default to /home/tlatorre/local/lib/python2.7/site-packages so you should add the following to your .bashrc file: export PYTHONPATH=$HOME/local/lib/python2.7/site-packages/:$PYTHONPATH before using the scripts installed to ~/local/bin.
2020-04-27update submit-grid-jobs to include priority in condor submit filetlatorre
2020-04-27add a script to plot the results of the ROOT fitstlatorre
2020-04-15update submit-grid-jobs to add a priority column to the databasetlatorre
This commit updates submit-grid-jobs so that jobs are now submitted first in order of priority and then timestamp. So any jobs with a higher priority will be submitted preferentially first, and within each priority level jobs are submitted in the order they are added to the database.
2020-04-15add ability to retry jobs in submit-grid-jobstlatorre
This commit updates submit-grid-jobs to look for jobs in the RETRY state and to retry them if the number of retries is less than --max-retries. This way if you ever want to retry a bunch of jobs you can update the database: $ sqlite3 ~/state.db sqlite> update state set state = 'RETRY' where state == 'FAILED'; And then rerun submit-grid-jobs with more retries: $ submit-grid-jobs --max-retries 10 ---auto
2020-04-15fix typo in submit-grid-jobstlatorre
2020-04-14add some tests to gen-dark-mattertlatorre
2020-04-14update TODOtlatorre
2020-04-14extend electron range tables up to 1 TeVtlatorre
2020-04-13speed up submit-grid-jobs a lot by only calling condor_q oncetlatorre
2020-04-13update plot-fit-results script to be able to handle files with ↵tlatorre
multi-particle fits
2020-04-13update plot script to be able to handle files with multi-particle fitstlatorre
2020-04-13update plot-energy to fix a bug with muons and michels since we now store ↵tlatorre
more than one fit per particle combo
2020-04-13fix a few bugs in cat-grid-jobs since I now add 2 fit results per particle combotlatorre
2020-04-13update plot script now that we have multiple fits per particle combotlatorre
2020-04-13fix a few bugs in plot-energytlatorre
2020-04-13fit for up to 5 peakstlatorre
This commit updates fit.c to start with 5 peaks for the direction seeds. I chose this number because I did some testing with the test-find-peaks program on the atmospheric MC and it looks like 5 peaks were necessary to capture the majority of the peaks.
generated by cgit (git 2.34.1) at 2025-05-07 19:15:17 +0000