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<title>sddm/utils/cat-grid-jobs, branch master</title>
<subtitle>Code for the self-destructing dark matter search in SNO</subtitle>
<link rel='alternate' type='text/html' href='https://www.tlatorre.com/cgit/sddm/'/>
<entry>
<title>bump version to 3</title>
<updated>2020-11-16T17:22:34+00:00</updated>
<author>
<name>tlatorre</name>
<email>tlatorre@uchicago.edu</email>
</author>
<published>2020-11-16T17:22:34+00:00</published>
<link rel='alternate' type='text/html' href='https://www.tlatorre.com/cgit/sddm/commit/?id=3d3d9ce306137f347b939d07f36cf050af674fec'/>
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<pre>
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</content>
</entry>
<entry>
<title>update cat-grid-jobs to reprocess all zdabs</title>
<updated>2020-11-02T00:23:58+00:00</updated>
<author>
<name>tlatorre</name>
<email>tlatorre@uchicago.edu</email>
</author>
<published>2020-11-02T00:23:58+00:00</published>
<link rel='alternate' type='text/html' href='https://www.tlatorre.com/cgit/sddm/commit/?id=220377d85d8cf71d37a47b160ff71bdfadce8f38'/>
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</entry>
<entry>
<title>fix cat-grid-jobs since queue update</title>
<updated>2020-11-01T18:40:17+00:00</updated>
<author>
<name>tlatorre</name>
<email>tlatorre@uchicago.edu</email>
</author>
<published>2020-11-01T18:40:17+00:00</published>
<link rel='alternate' type='text/html' href='https://www.tlatorre.com/cgit/sddm/commit/?id=6ffab86daa351824571a75fba9c76b53078b45bb'/>
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</entry>
<entry>
<title>catch Exception when zdab-cat fails and continue</title>
<updated>2020-07-28T09:32:27+00:00</updated>
<author>
<name>tlatorre</name>
<email>tlatorre@uchicago.edu</email>
</author>
<published>2020-07-28T09:32:27+00:00</published>
<link rel='alternate' type='text/html' href='https://www.tlatorre.com/cgit/sddm/commit/?id=9ec84cb13bcd2d636588506644d111c7e9f504b1'/>
<id>9ec84cb13bcd2d636588506644d111c7e9f504b1</id>
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</entry>
<entry>
<title>only recreate the fits dataset if there are new fits</title>
<updated>2020-06-22T17:47:48+00:00</updated>
<author>
<name>tlatorre</name>
<email>tlatorre@uchicago.edu</email>
</author>
<published>2020-06-22T17:47:48+00:00</published>
<link rel='alternate' type='text/html' href='https://www.tlatorre.com/cgit/sddm/commit/?id=a3b4f83d38c6c8aa6eb4ba7c0944fc31cb66c7ab'/>
<id>a3b4f83d38c6c8aa6eb4ba7c0944fc31cb66c7ab</id>
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</entry>
<entry>
<title>update cat-grid-jobs to not use hdf5 resize</title>
<updated>2020-06-22T14:03:51+00:00</updated>
<author>
<name>tlatorre</name>
<email>tlatorre@uchicago.edu</email>
</author>
<published>2020-06-22T14:03:51+00:00</published>
<link rel='alternate' type='text/html' href='https://www.tlatorre.com/cgit/sddm/commit/?id=d64a97a832d4866d286ec48ba0f8f15ac471d046'/>
<id>d64a97a832d4866d286ec48ba0f8f15ac471d046</id>
<content type='text'>
This commit updates cat-grid-jobs to just add all the fits at once at the end
instead of continuously resizing the fits dataset. The reason for this is that
I noticed that several fit results files would occasionally have a large block
of the fits be set to all zeros. I have no idea how this happened, but I
suspect it might have been a bug with resizing the dataset so many times.
</content>
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<pre>
This commit updates cat-grid-jobs to just add all the fits at once at the end
instead of continuously resizing the fits dataset. The reason for this is that
I noticed that several fit results files would occasionally have a large block
of the fits be set to all zeros. I have no idea how this happened, but I
suspect it might have been a bug with resizing the dataset so many times.
</pre>
</div>
</content>
</entry>
<entry>
<title>set reprocessed attribute to 1 instead of True</title>
<updated>2020-06-22T13:49:01+00:00</updated>
<author>
<name>tlatorre</name>
<email>tlatorre@uchicago.edu</email>
</author>
<published>2020-06-22T13:49:01+00:00</published>
<link rel='alternate' type='text/html' href='https://www.tlatorre.com/cgit/sddm/commit/?id=da3448e12c7fdfb00e6d5f2a76cf4ec3ceb2ae7f'/>
<id>da3448e12c7fdfb00e6d5f2a76cf4ec3ceb2ae7f</id>
<content type='text'>
This commit updates cat-grid-jobs to change the reprocessed attribute to be 1
instead of True since the previous value was giving the following warning:

/usr/lib64/python2.7/site-packages/tables/attributeset.py:298: DataTypeWarning: Unsupported type for attribute 'reprocessed' in node '/'. Offending HDF5 class: 8
  value = self._g_getattr(self._v_node, name)

when opening them up with pandas read_hdf() function.
</content>
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<pre>
This commit updates cat-grid-jobs to change the reprocessed attribute to be 1
instead of True since the previous value was giving the following warning:

/usr/lib64/python2.7/site-packages/tables/attributeset.py:298: DataTypeWarning: Unsupported type for attribute 'reprocessed' in node '/'. Offending HDF5 class: 8
  value = self._g_getattr(self._v_node, name)

when opening them up with pandas read_hdf() function.
</pre>
</div>
</content>
</entry>
<entry>
<title>update cat-grid-jobs to use reprocessed files if they're available</title>
<updated>2020-06-15T06:55:28+00:00</updated>
<author>
<name>tlatorre</name>
<email>tlatorre@uchicago.edu</email>
</author>
<published>2020-06-15T06:55:28+00:00</published>
<link rel='alternate' type='text/html' href='https://www.tlatorre.com/cgit/sddm/commit/?id=6d2445aa552cd923df18f753a00d83fc37b356e6'/>
<id>6d2445aa552cd923df18f753a00d83fc37b356e6</id>
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<pre>
</pre>
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</content>
</entry>
<entry>
<title>update utils/ folder to make a python package called sddm</title>
<updated>2020-05-11T15:30:39+00:00</updated>
<author>
<name>tlatorre</name>
<email>tlatorre@uchicago.edu</email>
</author>
<published>2020-05-11T15:30:39+00:00</published>
<link rel='alternate' type='text/html' href='https://www.tlatorre.com/cgit/sddm/commit/?id=15fc972c89a4366a06755daeedaac52f91762ecd'/>
<id>15fc972c89a4366a06755daeedaac52f91762ecd</id>
<content type='text'>
This commit adds an sddm python package to the utils/ folder. This allows me to
consolidate code used across all the various scripts. This package is now
installed by default to /home/tlatorre/local/lib/python2.7/site-packages so you
should add the following to your .bashrc file:

    export PYTHONPATH=$HOME/local/lib/python2.7/site-packages/:$PYTHONPATH

before using the scripts installed to ~/local/bin.
</content>
<content type='xhtml'>
<div xmlns='http://www.w3.org/1999/xhtml'>
<pre>
This commit adds an sddm python package to the utils/ folder. This allows me to
consolidate code used across all the various scripts. This package is now
installed by default to /home/tlatorre/local/lib/python2.7/site-packages so you
should add the following to your .bashrc file:

    export PYTHONPATH=$HOME/local/lib/python2.7/site-packages/:$PYTHONPATH

before using the scripts installed to ~/local/bin.
</pre>
</div>
</content>
</entry>
<entry>
<title>fix a few bugs in cat-grid-jobs since I now add 2 fit results per particle combo</title>
<updated>2020-04-13T20:24:41+00:00</updated>
<author>
<name>tlatorre</name>
<email>tlatorre@uchicago.edu</email>
</author>
<published>2020-04-13T20:24:41+00:00</published>
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<id>6c919121c1182ac32da087f0fd3c33c9746445e7</id>
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